3D Virtual Embryo Download Section

How to reconstruct 3D embryo ?

From Confocal imaging to 3D Model: A protocol for creating 3D digital replica of ascidian embryos.
Francois Robin, Delphine Dauga, Olivier Tassy, Daniel Sobral, Fabrice Daian and Patrick Lemaire.
Imaging in Developmental Biology, 2010 January.

Programs that we used :
- 3DEmbryo_Reconstruction

How to launch 3D Virtual Embryo?

  1. Install Java (from the 1.5 release) If you are using Windows, the installation of java should start automatically. But you can find the installer here (Choose to download the Java SE corresponding to your operating system). Java is already installed on Mac OS X 10.4. Make sure it is up to date.

  2. Click on the link below and choose 'Execute' to start 3D Virtual Embryo v1.2 (2012-10-17):

    Start 3D Virtual Embryo


Quick tour - Screenshots
Biometry Virtual cell ablation
surface of contact expression pattern
expression pattern fate map
lineage slicer

right clic to dowload the file or left clic to see it (requires the quick time plugin)

Aniseed version 3.0 -     Contact: contact@aniseed.cnrs.fr
ANISEED, NISEED Website and Database are under GPL License.    

© Tassy, Daian, Sobral, Dauga, Khoueiry, Salgado, Lemaire 2007